Publications

Found 174 results
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Doyle FJ, Saffer DR.  2004.  Analysis of linear programming in model predictive control. COMPUTERS & CHEMICAL ENGINEERING. 28:2749-2763.
Doyle FJ, Cordeiro CF, Sundaram SS, Immanuel CD.  2003.  Population balance PSD model for emulsion polymerization with steric stabilizers. AICHE JOURNAL. 49:1392-1404.
Doyle FJ, Robinson AS, Raden D, Xu P.  2005.  Analysis of unfolded protein response during single-chain antibody expression in Saccaromyces cerevisiae reveals different roles for BiP and PDI in folding. METABOLIC ENGINEERING. 7:269-279.
Doyle, III FJ, Litster JD, Cameron IT, Immanuel CD, Poon JM-H, Ramachandran R, Glaser T, Wang F.Y, Sanders CFW.  2009.  Model predictive control of continuous drum granulation. JOURNAL OF PROCESS CONTROL. 19:615-622.
Doyle, III FJ, Shoemaker JE, Gunawan R, Mirsky H, Stelling J, Taylor SR, Bagheri N, Kwei E.  2009.  Automatic Control in Systems Biology. SPRINGER HANDBOOK OF AUTOMATION. :1335-1360.
Doyle, III FJ, Mensh BD, Burnett DR, Huyett LM, Zisser HC.  2014.  Glucose Sensing in the Peritoneal Space Offers Faster Kinetics Than Sensing in the Subcutaneous Space. DIABETES. 63:2498-2505.
Doyle, III FJ, Zisser H, Dassau E, Campos-Cornejo F, Jovanovic L, Campos-Delgado DU, Espinoza-Trejo D.  2010.  An Advisory Protocol for Rapid- and Slow-Acting Insulin Therapy Based on a Run-to-Run Methodology. DIABETES TECHNOLOGY & THERAPEUTICS. 12:555-565.
Doyle, III FJ, Pinsker JE, Forlenza GP, Ly TT, Reuschel-DiVirgilio S, Maahs DM, Gondhalekar R, Dassau E, R. Wadwa P, Messer LH et al..  2017.  Outpatient Closed-Loop Control with Unannounced Moderate Exercise in Adolescents Using Zone Model Predictive Control. DIABETES TECHNOLOGY & THERAPEUTICS. 19:331-339.
Doyle, III FJ, B. Bequette W, Forlenza GP, Ly TT, Howsmon DP, Pinsker JE, Mauritzen E, Cameron F, Dassau E, Deshpande S et al..  2017.  Application of Zone Model Predictive Control Artificial Pancreas During Extended Use of Infusion Set and Sensor: A Randomized Crossover-Controlled Home-Use Trial. DIABETES CARE. 40:1096-1102.
Doyle, III FJ, Magrofuoco E, Elvassore N.  2012.  Theoretical analysis of insulin-dependent glucose uptake heterogeneity in 3D bioreactor cell culture. BIOTECHNOLOGY PROGRESS. 28:833-845.
Doyle, III FJ, Pinto MA, Immanuel CD.  2008.  A two-level discretisation algorithm for the efficient solution of higher-dimensional population balance models. CHEMICAL ENGINEERING SCIENCE. 63:1304-1314.
Doyle, III FJ, Villeneuve DL, Shoemaker JE, Garcia-Reyero N, Perkins EJ, Liu L, Gayen K.  2010.  Fathead minnow steroidogenesis: in silico analyses reveals tradeoffs between nominal target efficacy and robustness to cross-talk. BMC SYSTEMS BIOLOGY. 4
Doyle, III FJ, B. Bequette W, Dassau E, Clinton P, Wilkinson J, Cameron F, H. Chase P, Cobry E, Lee H, Caswell K et al..  2010.  Prevention of Nocturnal Hypoglycemia Using Predictive Alarm Algorithms and Insulin Pump Suspension. DIABETES CARE. 33:1013-1017.
Doyle, III FJ, Pinto MA, Immanuel CD.  2007.  A feasible solution technique for higher-dimensional population balance models. COMPUTERS & CHEMICAL ENGINEERING. 31:1242-1256.
Doyle FJ, Mahadevan R, Edwards JS, Gadkar KG.  2005.  Estimating optimal profiles of genetic alterations using constraint-based models. BIOTECHNOLOGY AND BIOENGINEERING. 89:243-251.
Doyle, III FJ, Pistikopoulos EN, Dua P.  2006.  Model-based blood glucose control for Type 1 diabetes via parametric programming. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING. 53:1478-1491.
Doyle FJ, Schwaber JS, Ogunnaike BA, Vadigepalli R, Zak DE, Gonye GE.  2005.  Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling. COMPUTERS & CHEMICAL ENGINEERING. 29:547-563.
Doyle, III FJ, Herzog ED, Thoroughman KA, Taylor SR, Webb AB.  2012.  Weakly Circadian Cells Improve Resynchrony. PLOS COMPUTATIONAL BIOLOGY. 8
Doyle, III FJ, Pistikopoulos EN, Dua P.  2009.  Multi-objective blood glucose control for type 1 diabetes. MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING. 47:343-352.
Doyle, III FJ, Lee JWook, Hirota T, St John PC, Sawa M, Noguchi T, Kay SA, Sonntag T, Welsh DK, Schultz PG et al..  2012.  Identification of Small Molecule Activators of Cryptochrome. SCIENCE. 337:1094-1097.
Dozier J, Painter TH, PADEN B.  2003.  Automated spectro-goniometer: A spherical robot for the field measurement of the directional reflectance of snow. REVIEW OF SCIENTIFIC INSTRUMENTS. 74:5179-5188.
Drawert B, Golkaram M, Petzold LR, Hellander S.  2016.  Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. PLOS COMPUTATIONAL BIOLOGY. 12
Ducrot V, Garber K, Pastorok R, Kanarek A, Bruins RJF, Forbes VE, Rebarber R, Salice CJ, Galic N, Harvey BC et al..  2017.  A Framework for Predicting Impacts on Ecosystem Services From (Sub)Organismal Responses to Chemicals. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. 36:845-859.
Durham J, Moehlis J.  2008.  Feedback control of canards. CHAOS. 18

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