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Doyle FJ, Mahadevan R, Gadkar KG.  2005.  Batch control of genetic alterations for optimal metabolic engineering. PROCEEDINGS OF THE AMERICAN CONTROL CONFERENCE. :3108-3114.
Doyle FJ, Harrison CA, Crowley TJ.  2003.  Hybrid model-based approach to batch-to-batch control of particle size distribution in emulsion polymerization. COMPUTERS & CHEMICAL ENGINEERING. 27:1153-1163.
Doyle, III FJ.  2012.  Zone Model Predictive Control of an Artificial Pancreas. :8-9.
Doyle, III FJ, Pinto MA, Immanuel CD.  2007.  A feasible solution technique for higher-dimensional population balance models. COMPUTERS & CHEMICAL ENGINEERING. 31:1242-1256.
Doyle, III FJ, B. Bequette W, Dassau E, Buckingham BA.  2008.  Detection of a Meal Using Continuous Glucose Monitoring implications for an artificial beta-cell. DIABETES CARE. 31:295-300.
Doyle, III FJ, Herzog ED, Tsai CA, Granados-Fuentes D, Mazuski C, Harang R, Petzold LR, Meeker K, Kim J, An S.  2013.  A neuropeptide speeds circadian entrainment by reducing intercellular synchrony. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 110:E4355-E4361.
Doyle, III FJ, Wang Y.  2011.  The exponential synchronization of Kuramoto oscillator networks in the presence of combined global and local cues. Proceedings of the American Control Conference.
Doyle FJ, Saffer DR.  2005.  Efficient linear programming formulations of model predictive control for cross-directional control of a paper machine. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 44:2134-2144.
Doyle FJ, Gilles ED, Stelling J.  2004.  Robustness properties of circadian clock architectures. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 101:13210-13215.
Doyle, III FJ, Gondhalekar R, Dassau E.  2014.  State Estimation with Sensor Recalibrations and Asynchronous Measurements for MPC of an Artificial Pancreas to Treat T1DM. 47:224-230.
Douglas RG, Wang K, Putinar M.  2012.  Reducing subspaces for analytic multipliers of the Bergman space. JOURNAL OF FUNCTIONAL ANALYSIS. 263:1744-1765.
Doubeck M, Gibou F, Detrixhe M, Moehlis J.  2016.  A Fast Eulerian Approach for Computation of Global Isochrons in High Dimensions. SIAM JOURNAL ON APPLIED DYNAMICAL SYSTEMS. 15:1501-1527.
Doshi K, Chandrasekaran, iv S, Dewilde P.  2006.  Sensor networks and inverse scattering. :186-193.
Dong H, Belding-Royer E, Gersho A, Lin CH, Gibson JD, Chakares ID, Madhow U.  2003.  Speech coding for mobile ad hoc networks. CONFERENCE RECORD OF THE ASILOMAR CONFERENCE ON SIGNALS, SYSTEMS AND COMPUTERS. :280-284.
Dokucu MT, Park M-J, Doyle, III FJ.  2008.  Mufti-rate model predictive control of particle size distribution in a semibatch emulsion copolymerization reactor. JOURNAL OF PROCESS CONTROL. 18:105-120.
Dokucu MT, Doyle, III FJ.  2008.  Batch-to-Batch Control of Characteristic Points on the PSD in Experimental Emulsion Polymerization. AICHE JOURNAL. 54:3171-3187.
Dokucu MT, Park M-J, Doyle, III FJ.  2008.  Reduced-order methodologies for feedback control of particle size distribution in semi-batch emulsion copolymerization. CHEMICAL ENGINEERING SCIENCE. 63:1230-1245.
Doerfler F, Simpson-Porco JW, Shafiee Q, Bullo F, Vasquez JC, Guerrero JM.  2015.  Secondary Frequency and Voltage Control of Islanded Microgrids via Distributed Averaging. IEEE TRANSACTIONS ON INDUSTRIAL ELECTRONICS. 62:7025-7038.
Dodds Z, Morse AS, Hespanha J, Hager GD.  1998.  What can be done with an uncalibrated stereo system? IEEE INTERNATIONAL CONFERENCE ON ROBOTICS AND AUTOMATION. :1366-1372.
Dodds Z, Morse AS, Hager GD, Hespanha JP.  1998.  Decidability of robot positioning tasks using stereo vision systems. IEEE Conference on Decision and Control. :3736-3741.
Dodds Z, Morse AS, Hager GD, Hespanha JP.  1999.  What tasks can be performed with an uncalibrated stereo vision system? INTERNATIONAL JOURNAL OF COMPUTER VISION. 35:65-85.
Dodds Z, Morse AS, Hager GD, Hespanha JP.  1999.  Task specification and monitoring for uncalibrated hand/eye coordination. :1607-1613.
Dewilde P, Sheng Z, Chandrasekaran S.  2007.  Algorithms to solve hierarchically semi-separable systems. Operator Theory Advances and Applications. 176:255-+.
Deweese K, Gilbert JR, Boman EG.  2016.  Evaluating the Dual Randomized Kaczmarz Laplacian Linear Solver. INFORMATICA-JOURNAL OF COMPUTING AND INFORMATICS. 40:95-107.