Publications

Found 174 results
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Durham J, Moehlis J.  2008.  Feedback control of canards. CHAOS. 18
Ducrot V, Garber K, Pastorok R, Kanarek A, Bruins RJF, Forbes VE, Rebarber R, Salice CJ, Galic N, Harvey BC et al..  2017.  A Framework for Predicting Impacts on Ecosystem Services From (Sub)Organismal Responses to Chemicals. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. 36:845-859.
Drawert B, Golkaram M, Petzold LR, Hellander S.  2016.  Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. PLOS COMPUTATIONAL BIOLOGY. 12
Dozier J, Painter TH, PADEN B.  2003.  Automated spectro-goniometer: A spherical robot for the field measurement of the directional reflectance of snow. REVIEW OF SCIENTIFIC INSTRUMENTS. 74:5179-5188.
Doyle FJ, Saffer DR.  2004.  Analysis of linear programming in model predictive control. COMPUTERS & CHEMICAL ENGINEERING. 28:2749-2763.
Doyle, II FJ, Dassau E, Zisser HC, Huyett LM.  2015.  The Impact of Glucose Sensing Dynamics on the Closed-Loop Artificial Pancreas. Proceedings of the American Control Conference. :5116-5121.
Doyle, III FJ, Rodriguez-Fernandez M, Grosman B, Yuraszeck TM, Helwig BG, Leon LR.  2013.  Modeling the Intra- and Extracellular Cytokine Signaling Pathway under Heat Stroke in the Liver. PLOS ONE. 8
Doyle, III FJ, Magrofuoco E, Elvassore N.  2012.  Theoretical analysis of insulin-dependent glucose uptake heterogeneity in 3D bioreactor cell culture. BIOTECHNOLOGY PROGRESS. 28:833-845.
Doyle, III FJ, Dassau E, Zisser HC, Seborg DE, van Heusden K.  2012.  Control-Relevant Models for Glucose Control Using A Priori Patient Characteristics. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING. 59:1839-1849.
Doyle, III FJ, Pinsker JE, Dassau E, Seborg DE, Gondhalekar R, Lee JBok.  2016.  Enhanced Model Predictive Control (eMPC) Strategy for Automated Glucose Control. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 55:11857-11868.
Doyle, III FJ, Gondhalekar R, Dassau E.  2014.  Moving-horizon-like state estimation via continuous glucose monitor feedback in MPC of an artificial pancreas for type 1 diabetes. :310-315.
Doyle FJ, Immanuel CD.  2003.  Hierarchical multiobjective strategy for particle-size distribution control. AICHE JOURNAL. 49:2383-2399.
Doyle FJ, Gunawan R, Gadkar KG.  2005.  Iterative approach to model identification of biological networks. BMC BIOINFORMATICS. 6
Doyle, III FJ, Hori Y, Wang Y, Hara S.  2012.  The collective oscillation period of inter-coupled Goodwin oscillators. IEEE Conference on Decision and Control. :1627-1632.
Doyle FJ, Schwaber JS, Zak DE, Gonye GE.  2003.  Importance of input perturbations and stochastic gene expression in the reverse engineering of genetic regulatory networks: Insights from an identifiability analysis of an in silico network. GENOME RESEARCH. 13:2396-2405.
Doyle, III FJ, Dassau E, Zisser HC, Huyett LM.  2015.  Design and Evaluation of a Robust PID Controller for a Fully Implantable Artificial Pancreas. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 54:10311-10321.
Doyle, III FJ, Zisser H, Wollitzer AOkada, Seborg DE, Palerm CC, Jovanovic L, Bevier WC, Finan DA.  2007.  Calculatin the insulin to carbohydrate ratio using the hyperinsulinaemic-euglycaemic clamp - a novel use for a proven technique. DIABETES-METABOLISM RESEARCH AND REVIEWS. 23:472-478.
Doyle, III FJ, Shoemaker JE, Gunawan R, Mirsky H, Stelling J, Taylor SR, Bagheri N, Kwei E.  2009.  Automatic Control in Systems Biology. SPRINGER HANDBOOK OF AUTOMATION. :1335-1360.
Doyle FJ, Mahadevan R, Gadkar KG.  2005.  Batch control of genetic alterations for optimal metabolic engineering. PROCEEDINGS OF THE AMERICAN CONTROL CONFERENCE. :3108-3114.
Doyle, III FJ, Petzold LR, Smith KS, Taylor SR, Webb AB.  2010.  Velocity Response Curves Support the Role of Continuous Entrainment in Circadian Clocks. JOURNAL OF BIOLOGICAL RHYTHMS. 25:138-149.
Doyle, III FJ, Shoemaker J, Bagheri N, Mirsky H, Petzold L, Gunawan R, Hildebrandt S, Taylor S.  2010.  Systems Analysis for Systems Biology. SYSTEMS BIOMEDICINE: CONCEPTS AND PERSPECTIVES. :249-272.
Doyle, III FJ.  2012.  Zone Model Predictive Control of an Artificial Pancreas. :8-9.
Doyle, III FJ, Pinto MA, Immanuel CD.  2007.  A feasible solution technique for higher-dimensional population balance models. COMPUTERS & CHEMICAL ENGINEERING. 31:1242-1256.
Doyle FJ, Harrison CA, Crowley TJ.  2003.  Hybrid model-based approach to batch-to-batch control of particle size distribution in emulsion polymerization. COMPUTERS & CHEMICAL ENGINEERING. 27:1153-1163.
Doyle, III FJ, Herzog ED, Tsai CA, Granados-Fuentes D, Mazuski C, Harang R, Petzold LR, Meeker K, Kim J, An S.  2013.  A neuropeptide speeds circadian entrainment by reducing intercellular synchrony. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 110:E4355-E4361.

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