Publications

Found 174 results
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Durham J, Moehlis J.  2008.  Feedback control of canards. CHAOS. 18
Ducrot V, Garber K, Pastorok R, Kanarek A, Bruins RJF, Forbes VE, Rebarber R, Salice CJ, Galic N, Harvey BC et al..  2017.  A Framework for Predicting Impacts on Ecosystem Services From (Sub)Organismal Responses to Chemicals. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. 36:845-859.
Drawert B, Golkaram M, Petzold LR, Hellander S.  2016.  Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. PLOS COMPUTATIONAL BIOLOGY. 12
Dozier J, Painter TH, PADEN B.  2003.  Automated spectro-goniometer: A spherical robot for the field measurement of the directional reflectance of snow. REVIEW OF SCIENTIFIC INSTRUMENTS. 74:5179-5188.
Doyle FJ, Crowley TJ, Varner JD, Gadkar KG.  2003.  Cybernetic model predictive control of a continuous bioreactor with cell recycle. BIOTECHNOLOGY PROGRESS. 19:1487-1497.
Doyle, III FJ, Pistikopoulos EN, Dua P.  2009.  Multi-objective blood glucose control for type 1 diabetes. MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING. 47:343-352.
Doyle, III FJ, B. Bequette W, Dassau E, Wilson DM, Buckingham BA, H. Chase P, Zisser H, Lee H, Jovanovic L, Cameron F.  2010.  Real-Time Hypoglycemia Prediction Suite Using Continuous Glucose Monitoring A safety net for the artificial pancreas. DIABETES CARE. 33:1249-1254.
Doyle FJ.  2004.  A system biology approach to robustness analysis of cireadian rhythm. :185-185.
Doyle FJ, Kooijman SALM, Muller EB, Nisbet RM, Edmunds PJ.  2009.  Dynamic energy budgets in syntrophic symbiotic relationships between heterotrophic hosts and photoautotrophic symbionts. JOURNAL OF THEORETICAL BIOLOGY. 259:44-57.
Doyle, III FJ, Mensh BD, Burnett DR, Huyett LM, Zisser HC.  2014.  Glucose Sensing in the Peritoneal Space Offers Faster Kinetics Than Sensing in the Subcutaneous Space. DIABETES. 63:2498-2505.
Doyle, III FJ, Wang Y.  2013.  Exponential Synchronization Rate of Kuramoto Oscillators in the Presence of a Pacemaker. IEEE TRANSACTIONS ON AUTOMATIC CONTROL. 58:989-994.
Doyle, III FJ, Zisser H, Dassau E, Palerm CC, Jovanovic L, Buckingham BA.  2009.  In Silico Evaluation Platform for Artificial Pancreatic beta-Cell Development-A Dynamic Simulator for Closed-Loop Control with Hardware-in-the-Loop. DIABETES TECHNOLOGY & THERAPEUTICS. 11:187-194.
Doyle FJ, Mahadevan R.  2003.  On-line optimization of recombinant product in a fed-batch bioreactor. BIOTECHNOLOGY PROGRESS. 19:639-646.
Doyle FJ, Mahadevan R, Edwards JS, Gadkar KG.  2005.  Estimating optimal profiles of genetic alterations using constraint-based models. BIOTECHNOLOGY AND BIOENGINEERING. 89:243-251.
Doyle FJ, Castro JJ.  2004.  A pulp mill benchmark problem for control: application of plantwide control design. JOURNAL OF PROCESS CONTROL. 14:329-347.
Doyle FJ, Zak DE, Stelling J.  2005.  Sensitivity analysis of oscillatory (bio)chemical systems. COMPUTERS & CHEMICAL ENGINEERING. 29:663-673.
Doyle, III FJ.  2012.  Robustness in Nature: Challenges and Opportunities for the Systems Biology Community. Chinese Control and Decision Conference. :XI-XI.
Doyle, III FJ, Rodriguez-Fernandez M, Grosman B, Yuraszeck TM, Helwig BG, Leon LR.  2013.  Modeling the Intra- and Extracellular Cytokine Signaling Pathway under Heat Stroke in the Liver. PLOS ONE. 8
Doyle FJ, Saffer DR.  2004.  Analysis of linear programming in model predictive control. COMPUTERS & CHEMICAL ENGINEERING. 28:2749-2763.
Doyle, II FJ, Dassau E, Zisser HC, Huyett LM.  2015.  The Impact of Glucose Sensing Dynamics on the Closed-Loop Artificial Pancreas. Proceedings of the American Control Conference. :5116-5121.
Doyle, III FJ, Pinsker JE, Dassau E, Seborg DE, Gondhalekar R, Lee JBok.  2016.  Enhanced Model Predictive Control (eMPC) Strategy for Automated Glucose Control. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 55:11857-11868.
Doyle, III FJ, Gondhalekar R, Dassau E.  2014.  Moving-horizon-like state estimation via continuous glucose monitor feedback in MPC of an artificial pancreas for type 1 diabetes. :310-315.
Doyle, III FJ, Magrofuoco E, Elvassore N.  2012.  Theoretical analysis of insulin-dependent glucose uptake heterogeneity in 3D bioreactor cell culture. BIOTECHNOLOGY PROGRESS. 28:833-845.
Doyle, III FJ, Dassau E, Zisser HC, Seborg DE, van Heusden K.  2012.  Control-Relevant Models for Glucose Control Using A Priori Patient Characteristics. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING. 59:1839-1849.
Doyle, III FJ, Hori Y, Wang Y, Hara S.  2012.  The collective oscillation period of inter-coupled Goodwin oscillators. IEEE Conference on Decision and Control. :1627-1632.

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