Publications

Found 174 results
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Durham J, Moehlis J.  2008.  Feedback control of canards. CHAOS. 18
Ducrot V, Garber K, Pastorok R, Kanarek A, Bruins RJF, Forbes VE, Rebarber R, Salice CJ, Galic N, Harvey BC et al..  2017.  A Framework for Predicting Impacts on Ecosystem Services From (Sub)Organismal Responses to Chemicals. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. 36:845-859.
Drawert B, Golkaram M, Petzold LR, Hellander S.  2016.  Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. PLOS COMPUTATIONAL BIOLOGY. 12
Dozier J, Painter TH, PADEN B.  2003.  Automated spectro-goniometer: A spherical robot for the field measurement of the directional reflectance of snow. REVIEW OF SCIENTIFIC INSTRUMENTS. 74:5179-5188.
Doyle, III FJ, Hori Y, Wang Y, Hara S.  2012.  The collective oscillation period of inter-coupled Goodwin oscillators. IEEE Conference on Decision and Control. :1627-1632.
Doyle FJ, Immanuel CD.  2003.  Hierarchical multiobjective strategy for particle-size distribution control. AICHE JOURNAL. 49:2383-2399.
Doyle FJ, Gunawan R, Gadkar KG.  2005.  Iterative approach to model identification of biological networks. BMC BIOINFORMATICS. 6
Doyle, III FJ, Zisser H, Wollitzer AOkada, Seborg DE, Palerm CC, Jovanovic L, Bevier WC, Finan DA.  2007.  Calculatin the insulin to carbohydrate ratio using the hyperinsulinaemic-euglycaemic clamp - a novel use for a proven technique. DIABETES-METABOLISM RESEARCH AND REVIEWS. 23:472-478.
Doyle FJ, Schwaber JS, Zak DE, Gonye GE.  2003.  Importance of input perturbations and stochastic gene expression in the reverse engineering of genetic regulatory networks: Insights from an identifiability analysis of an in silico network. GENOME RESEARCH. 13:2396-2405.
Doyle, III FJ, Dassau E, Zisser HC, Huyett LM.  2015.  Design and Evaluation of a Robust PID Controller for a Fully Implantable Artificial Pancreas. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 54:10311-10321.
Doyle, III FJ, Petzold LR, Smith KS, Taylor SR, Webb AB.  2010.  Velocity Response Curves Support the Role of Continuous Entrainment in Circadian Clocks. JOURNAL OF BIOLOGICAL RHYTHMS. 25:138-149.
Doyle, III FJ, Shoemaker J, Bagheri N, Mirsky H, Petzold L, Gunawan R, Hildebrandt S, Taylor S.  2010.  Systems Analysis for Systems Biology. SYSTEMS BIOMEDICINE: CONCEPTS AND PERSPECTIVES. :249-272.
Doyle, III FJ, Shoemaker JE, Gunawan R, Mirsky H, Stelling J, Taylor SR, Bagheri N, Kwei E.  2009.  Automatic Control in Systems Biology. SPRINGER HANDBOOK OF AUTOMATION. :1335-1360.
Doyle FJ, Mahadevan R, Gadkar KG.  2005.  Batch control of genetic alterations for optimal metabolic engineering. PROCEEDINGS OF THE AMERICAN CONTROL CONFERENCE. :3108-3114.
Doyle FJ, Harrison CA, Crowley TJ.  2003.  Hybrid model-based approach to batch-to-batch control of particle size distribution in emulsion polymerization. COMPUTERS & CHEMICAL ENGINEERING. 27:1153-1163.
Doyle, III FJ.  2012.  Zone Model Predictive Control of an Artificial Pancreas. :8-9.
Doyle, III FJ, Pinto MA, Immanuel CD.  2007.  A feasible solution technique for higher-dimensional population balance models. COMPUTERS & CHEMICAL ENGINEERING. 31:1242-1256.
Doyle, III FJ, B. Bequette W, Dassau E, Buckingham BA.  2008.  Detection of a Meal Using Continuous Glucose Monitoring implications for an artificial beta-cell. DIABETES CARE. 31:295-300.
Doyle, III FJ, Herzog ED, Tsai CA, Granados-Fuentes D, Mazuski C, Harang R, Petzold LR, Meeker K, Kim J, An S.  2013.  A neuropeptide speeds circadian entrainment by reducing intercellular synchrony. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 110:E4355-E4361.
Doyle, III FJ, Wang Y.  2011.  The exponential synchronization of Kuramoto oscillator networks in the presence of combined global and local cues. Proceedings of the American Control Conference.
Doyle FJ, Saffer DR.  2005.  Efficient linear programming formulations of model predictive control for cross-directional control of a paper machine. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 44:2134-2144.
Doyle FJ, Gilles ED, Stelling J.  2004.  Robustness properties of circadian clock architectures. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA. 101:13210-13215.
Doyle, III FJ, Gondhalekar R, Dassau E.  2014.  State Estimation with Sensor Recalibrations and Asynchronous Measurements for MPC of an Artificial Pancreas to Treat T1DM. 47:224-230.
Doyle, III FJ, Pinsker JE, Dassau E, Seborg DE, Gondhalekar R, Bradley PK, Huyett L, Lee JBok, Bevier WC, Zisser HC.  2016.  Randomized Crossover Comparison of Personalized MPC and PID Control Algorithms for the Artificial Pancreas. DIABETES CARE. 39:1135-1142.
Doyle, III FJ, Zisser H, Seborg DE, Palerm CC, Jovanovic L, Bevier WC, Finan DA.  2008.  Identification of empirical dynamic models from type 1 diabetes subject data. Proceedings of the American Control Conference. :2099-+.

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