Publications

Found 174 results
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Durham J, Moehlis J.  2008.  Feedback control of canards. CHAOS. 18
Ducrot V, Garber K, Pastorok R, Kanarek A, Bruins RJF, Forbes VE, Rebarber R, Salice CJ, Galic N, Harvey BC et al..  2017.  A Framework for Predicting Impacts on Ecosystem Services From (Sub)Organismal Responses to Chemicals. ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY. 36:845-859.
Drawert B, Golkaram M, Petzold LR, Hellander S.  2016.  Macromolecular Crowding Regulates the Gene Expression Profile by Limiting Diffusion. PLOS COMPUTATIONAL BIOLOGY. 12
Dozier J, Painter TH, PADEN B.  2003.  Automated spectro-goniometer: A spherical robot for the field measurement of the directional reflectance of snow. REVIEW OF SCIENTIFIC INSTRUMENTS. 74:5179-5188.
Doyle FJ, Robinson AS, Raden D, Xu P.  2005.  Analysis of unfolded protein response during single-chain antibody expression in Saccaromyces cerevisiae reveals different roles for BiP and PDI in folding. METABOLIC ENGINEERING. 7:269-279.
Doyle, III FJ, Gondhalekar R, Dassau E.  2014.  MPC Design for Rapid Pump-Attenuation and Expedited Hyperglycemia Response to Treat T1DM with an Artificial Pancreas. Proceedings of the American Control Conference. :4224-4230.
Doyle, III FJ, Dassau E, Seborg DE, Harvey RA, Jovanovic L, Bevier WC, Zisser HC.  2014.  Clinical Evaluation of an Automated Artificial Pancreas Using Zone-Model Predictive Control and Health Monitoring System. DIABETES TECHNOLOGY & THERAPEUTICS. 16:348-357.
Doyle FJ, Bagheri N, Stelling J.  2005.  Optimal phase-tracking of the nonlinear circadian oscillator. PROCEEDINGS OF THE AMERICAN CONTROL CONFERENCE. :3235-3240.
Doyle, III FJ, Villeneuve DL, Shoemaker JE, Garcia-Reyero N, Perkins EJ, Liu L, Gayen K.  2010.  Fathead minnow steroidogenesis: in silico analyses reveals tradeoffs between nominal target efficacy and robustness to cross-talk. BMC SYSTEMS BIOLOGY. 4
Doyle, III FJ, Hammamieh R, Daigle, Jr. BJ, Muhie SY, Petzold L, Yang R, Jett M.  2013.  Core modular blood and brain biomarkers in social defeat mouse model for post traumatic stress disorder. BMC SYSTEMS BIOLOGY. 7
Doyle, III FJ, Dassau E, Fuller RP, Jovanovic L, Fuller SM, Bevier WC, Rubin RR, Zisser HC.  2014.  Artificial Pancreas (AP) Clinical Trial Participants' Acceptance of Future AP Technology. DIABETES TECHNOLOGY & THERAPEUTICS. 16:590-595.
Doyle FJ, Castro JJ.  2004.  A pulp mill benchmark problem for control: problem description. JOURNAL OF PROCESS CONTROL. 14:17-29.
Doyle, III FJ, Gondhalekar R, Dassau E.  2015.  Velocity-weighting to prevent controller-induced hypoglycemia in MPC of an artificial pancreas to treat T1DM. Proceedings of the American Control Conference. :1635-1640.
Doyle FJ, Mahadevan R, Allcock AC.  2002.  Control-relevant scheduling of polymer grade transitions. AICHE JOURNAL. 48:1754-1764.
Doyle FJ, Hernjak N.  2005.  Glucose control design using nonlinearity assessment techniques. AICHE JOURNAL. 51:544-554.
Doyle, III FJ, Wang Y.  2009.  Stability Analysis for Set-Point-Related Indirect Iterative Learning Control. IEEE Conference on Decision and Control. :5702-5707.
Doyle FJ, Bhartiya S.  2004.  Mathematical model predictions of a plugging phenomenon in an industrial single-vessel pulp digester. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 43:5225-5232.
Doyle, III FJ, Zisser H, Dassau E, Campos-Cornejo F, Jovanovic L, Campos-Delgado DU, Espinoza-Trejo D.  2010.  An Advisory Protocol for Rapid- and Slow-Acting Insulin Therapy Based on a Run-to-Run Methodology. DIABETES TECHNOLOGY & THERAPEUTICS. 12:555-565.
Doyle, III FJ, Petzold LR, Taylor SR.  2008.  Oscillator model reduction preserving the phase response: Application to the circadian clock. BIOPHYSICAL JOURNAL. 95:1658-1673.
Doyle, III FJ, Zisser H, Dassau E, Grosman B, Seborg DE, Wang Y, Harvey RA, Percival MW, Jovanovic L, Bevier W et al..  2010.  Quest for the Artificial Pancreas Combining Technology with Treatment. IEEE ENGINEERING IN MEDICINE AND BIOLOGY MAGAZINE. 29:53-62.
Doyle FJ, Dufour P, Bhartiya S.  2003.  Fundamental thermal-hydraulic pulp digester model with grade transition. AICHE JOURNAL. 49:411-425.
Doyle, III FJ, Pistikopoulos EN, Dua P.  2006.  Model-based blood glucose control for Type 1 diabetes via parametric programming. IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING. 53:1478-1491.
Doyle, III FJ, Rodriguez-Fernandez M, Banga JR, Zisser H, Palerm CC, Jovanovic L, Bevier WC.  2006.  Robust parameter estimation in a model for glucose kinetics in type 1 diabetes subjects. :3257-+.
Doyle, III FJ, Hori Y, Wang Y, Hara S.  2015.  Collective Oscillation Period of Inter-Coupled Biological Negative Cyclic Feedback Oscillators. IEEE TRANSACTIONS ON AUTOMATIC CONTROL. 60:1392-1397.
Doyle FJ, Park NJ.  2004.  Nonlinear model order reduction and control of particle size distribution in a semibatch vinyl acetate/butyl acrylate emulsion copolymerization reactor. KOREAN JOURNAL OF CHEMICAL ENGINEERING. 21:168-176.

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