Publications

Found 140 results
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Khammash M, Sheppard PW, Rathinam M.  2010.  Efficient computation of parameter sensitivities of discrete stochastic chemical reaction networks. JOURNAL OF CHEMICAL PHYSICS. 132
Khammash M, Bamieh B, Chandra F, Motee N, Doyle JC.  2010.  Performance Limitations in Autocatalytic Networks in Biology. IEEE Conference on Decision and Control. :4715-4720.
Khammash M.  2008.  Reverse engineering: the architecture of biological networks. BIOTECHNIQUES. 44:323-+.
Khammash M, Dandach SH.  2011.  Stochastic strategies for survival: bacterial competence in Bacillus Subtilis. Proceedings of the American Control Conference. :2296-2301.
Khammash M, Loehning M, Allgoewer F, Hasenauer J.  2012.  Dynamical optimization using reduced order models: A method to guarantee performance. JOURNAL OF PROCESS CONTROL. 22:1490-1501.
Khammash M, Purvis KB, Astrom KJ.  2007.  Online control strategies for highly coupled cooperative UAVs. Proceedings of the American Control Conference. :5921-5926.
Khammash M, El-Samad H.  2006.  Coherence resonance: A mechanism for noise induced stable oscillations in gene regulatory networks. IEEE Conference on Decision and Control. :2382-+.
Khammash M, Atzberger PJ, Pahlajani CD.  2011.  Stochastic reduction method for biological chemical kinetics using time-scale separation. JOURNAL OF THEORETICAL BIOLOGY. 272:96-112.
Khammash M, Astroem KJ, Purvis KB.  2008.  Estimation and optimal configurations for localization using cooperative UAVs. IEEE TRANSACTIONS ON CONTROL SYSTEMS TECHNOLOGY. 16:947-958.
Khammash M, Samad HEl.  2005.  Stochastic modeling and analysis of genetic networks. IEEE CONFERENCE ON DECISION AND CONTROL - PROCEEDINGS. :2320-2325.
Khammash M, Gross CA, Kurata H, El-Samad H, Grigorova I, Iwasaki R, Ohtake H, Doyle JC.  2006.  Module-based analysis of robustness tradeoffs in the heat shock response system. PLOS COMPUTATIONAL BIOLOGY. 2:663-675.
Khammash A, Oropeza-Ramos L, Turner KL.  2005.  Robust feedback control design of an ultra-sensitive, high bandwidth tunneling accelerometer. Proceedings of the American Control Conference. :4176-4180.
Khammash M, Bamieh B, Motee N.  2012.  Stability analysis of quasi-polynomial dynamical systems with applications to biological network models. AUTOMATICA. 48:2945-2950.
Khammash M.  2011.  Pili Expression in Uropathgenic E. coli: Stochastic Switching and Epigenetic Control. 100:170-170.
Khammash M, Sheppard PW, Rathinam M.  2012.  A pathwise derivative approach to the computation of parameter sensitivities in discrete stochastic chemical systems. JOURNAL OF CHEMICAL PHYSICS. 136
Khammash M.  2008.  Stochastic analysis of noisy gene expression. :141-141.
Khammash M, Tan RZhen, Munsky B, van Oudenaarden A, Neuert G, Teytelman L.  2013.  Systematic Identification of Signal-Activated Stochastic Gene Regulation. SCIENCE. 339:584-587.
Khammash M, Bamieh B, Motee N.  2010.  Model Reduction of Polynomial Dynamical Systems Using Differential Algebra. IEEE Conference on Decision and Control. :6195-6200.
Kepner J, Gilbert J, Robinson E.  2011.  Linear Algebraic Notation and Definitions. GRAPH ALGORITHMS IN THE LANGUAGE OF LINEAR ALGEBRA. 22:13-18.
Kenig E, Cross M.C, Wiesenfeld K, Moehlis J.  2013.  Phase noise of oscillators with unsaturated amplifiers. PHYSICAL REVIEW E. 88
KEMNA AH, MELLICHAMP DA.  1995.  IDENTIFICATION OF COMBINED PHYSICAL AND EMPIRICAL-MODELS USING NONLINEAR A-PRIORI KNOWLEDGE. CONTROL ENGINEERING PRACTICE. 3:375-382.
Kelly R, Loria A, Teel AR.  2005.  Uniform parametric convergence in the adaptive control of mechanical systems. EUROPEAN JOURNAL OF CONTROL. 11:87-100.
Kellett CM, Teel AR.  2004.  Smooth Lyapunov functions and robustness of stability for difference inclusions. SYSTEMS & CONTROL LETTERS. 52:395-405.
Kellett CM, Shim HB, Teel AR.  2002.  Robustness of discontinuous feedback via sample and hold control. Proceedings of the American Control Conference. 1-6:3512-3517.
Kellett CM, Shim H, Teel AR.  2004.  Further results on robustness of (Possibly discontinuous) sample and hold feedback. IEEE TRANSACTIONS ON AUTOMATIC CONTROL. 49:1081-1089.

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